ID   HIM437033  standard; RNA; VRL; 1506 BP.
XX
AC   AJ437033;
XX
SV   AJ437033.1
XX
DT   22-JUL-2002 (Rel. 72, Created)
DT   22-JUL-2002 (Rel. 72, Last updated, Version 1)
XX
DE   Human immunodeficiency virus type 1 mRNA for gag polyprotein (gag gene),
DE   clone g21s1
XX
KW   gag gene; gag polyprotein.
XX
OS   Human immunodeficiency virus type 1
OC   Viruses; Retroid viruses; Retroviridae; Lentivirus;
OC   Primate lentivirus group.
XX
RN   [1]
RP   1-1506
RA   Saurya S.;
RT   ;
RL   Submitted (21-FEB-2002) to the EMBL/GenBank/DDBJ databases.
RL   Saurya S., Haemtological Medicine, Cambridge University, MRC Centre, Hills
RL   Road, Cambridge CB2 2QH, UNITED KINGDOM.
XX
RN   [2]
RA   Saurya S.;
RT   "Molecular characterization of HIV-1 from HAART treated AIDS patients";
RL   Thesis (2002), University of Cambridge, Cambridge, United Kingdom.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1506
FT                   /db_xref="taxon:11676"
FT                   /virion
FT                   /organism="Human immunodeficiency virus type 1"
FT                   /clone="g21s1"
FT                   /isolate="patient 21"
FT   CDS             1..1506
FT                   /gene="gag"
FT                   /product="gag polyprotein"
FT                   /function="involved in HIV-1 assembly"
FT                   /protein_id="CAD26922.1"
FT                   /translation="MGARASVLSGGKLDKWEKIRLRPGGKKHYKLKHIVWASRELERFA
FT                   LNPGLLETSEGCRQILKQLQPSLQTGTEEIKSLHNTVATLYCVHQRIDVRDTKEALDKI
FT                   EEEQNKSKQKAQQAAADTGNSNNQVSQNYPIVQNLQGQMVHQAISPRTLNAWVKVVEEK
FT                   AFSPEMIPMFAALSEGATPQDLNTMLNTGGAYQAAMQMLKETINEEAAEWDRLHPVQAG
FT                   PVAPGQIREPRGSDIAGTTSTLQEQIAWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPA
FT                   SILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGP
FT                   AATLEEMMTACQGVGGPGHKARVLAEAMSQMTNSATIMMQRGNFSNQRKPVKCFNCGKE
FT                   GHIARNCKAPRKKGCWKCGKEGHQMKDCSERQANFLGRIWPSHKERPGNFPQRRLEPTA
FT                   PPEESFRFGEETATPSQKQEPIDKELYPLASLKSLFGSDPSSQ"
XX
SQ   Sequence 1506 BP; 558 A; 296 C; 364 G; 288 T; 0 other;
     atgggtgcga gagcgtcagt attaagcggg ggaaaattag ataaatggga gaaaattcgg        60
     ttaaggccag gggggaagaa acattataaa ttaaaacata tagtatgggc aagcagggag       120
     ctagaacgat ttgcacttaa tcctggcctt ttagagacat cagaaggctg tagacagata       180
     ctaaaacagc tacaaccatc ccttcagaca ggaacagaag aaattaaatc cttacataat       240
     acagtagcaa ccctctattg tgtacatcaa aggatagatg taagagacac caaggaagct       300
     ttagacaaga tagaggaaga acaaaacaaa agtaagcaaa aggcacagca agcagcagct       360
     gatacaggaa acagcaacaa ccaggtcagc caaaattacc ctatagtgca gaaccttcag       420
     gggcaaatgg tacatcaagc catatcacct agaactttaa atgcatgggt aaaagtagta       480
     gaagaaaagg ctttcagccc agaaatgata cccatgtttg cagcattatc agaaggagcc       540
     accccacaag atttaaacac catgctaaac acaggggggg catatcaagc agctatgcaa       600
     atgttaaaag agaccatcaa tgaggaagct gcagaatggg atagattgca tccagtacag       660
     gcagggcctg ttgcaccagg ccagataaga gaaccaaggg gaagtgacat agcaggaact       720
     actagtaccc ttcaggaaca aatagcatgg atgacaaata atccacctat cccagtagga       780
     gaaatctata agagatggat aatactagga ttaaataaaa tagtaaggat gtatagtcct       840
     gccagcattc tagacataag gcaaggacca aaggaaccct ttagagacta tgtagaccgg       900
     ttctataaaa ctctaagagc cgaacaagct tcacaggagg taaaaaattg gatgacagaa       960
     accttgttgg tccaaaatgc gaacccagat tgtaagacca ttttaaaagc attagggcca      1020
     gcagctacac tagaggaaat gatgacagca tgtcaaggag tgggaggacc tggccataaa      1080
     gcaagagttt tggctgaagc aatgagccaa atgacaaatt cagctacaat aatgatgcag      1140
     agaggcaatt ttagcaacca aagaaagcct gttaagtgtt tcaattgtgg caaagaaggg      1200
     cacatagcca gaaattgcaa ggcccccagg aaaaagggct gttggaaatg tggaaaggag      1260
     ggacaccaaa tgaaagattg ttctgagaga caggctaatt ttttagggag aatctggcct      1320
     tcccacaagg aaaggccagg gaattttcct cagagaaggc tagagccaac agccccacca      1380
     gaggagagct tcaggtttgg ggaagagaca gcaactccct ctcagaagca ggagccgata      1440
     gacaaggagc tgtatccctt agcctccctc aaatcactct ttggcagcga cccgtcgtca      1500
     cagtaa                                                                 1506
//