ID   AF465155   standard; DNA; MAM; 344 BP.
XX
AC   AF465155;
XX
SV   AF465155.1
XX
DT   21-FEB-2002 (Rel. 70, Created)
DT   22-JUL-2002 (Rel. 72, Last updated, Version 3)
XX
DE   Bos taurus BTAIL8DS4 genomic sequence containing highly polymorphic single
DE   nucleotide sites.
XX
KW   .
XX
OS   Bos taurus (cow)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Cetartiodactyla; Ruminantia; Pecora; Bovoidea; Bovidae; Bovinae;
OC   Bos.
XX
RN   [1]
RP   1-344
RX   MEDLINE; 22012001.
RX   PUBMED; 12016516.
RA   Heaton M.P., Harhay G.P., Bennett G.L., Stone R.T., Grosse W.M., Casas E.,
RA   Keele J.W., Smith T.P.L., Chitko-McKown C.G., Laegreid W.W.;
RT   "Selection and use of SNP markers for animal identification and paternity
RT   analysis in U.S. beef cattle";
RL   Mamm. Genome 13(5):272-281(2002).
XX
RN   [2]
RP   1-344
RA   Heaton M.P.;
RT   ;
RL   Submitted (04-JAN-2002) to the EMBL/GenBank/DDBJ databases.
RL   Animal Health Research Unit, USDA, ARS, U.S. Meat Animal Research Center
RL   (MARC), P.O. Box 166, US Spur 18D, Clay Center, NE 68933, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1..344
FT                   /db_xref="taxon:9913"
FT                   /note="BTAIL8DS4; SNP haplotype markers for this gene locus
FT                   were (AH2-1 and AH2-2) were mapped approximately 84 cM (+/-
FT                   3 cM) from the centromeric end of BTA06 on the MARC Bos
FT                   taurus linkage map; polymorphisms were identified in DNA
FT                   sequence from 96 sires of the MARC Beef Cattle Diversity
FT                   Panel (MBCDP) version 2.1 (Heaton et al., 2001, Mamm.
FT                   Genome 12: 219-226) common: cattle"
FT                   /organism="Bos taurus"
FT   3'UTR           <1..>344
FT   primer_bind     1..21
FT                   /note="MARC primer ID: 14611; derived from the Bos taurus
FT                   interleukin 8 (IL8) sequence deposited in GenBank Accession
FT                   Number AF061521"
FT   variation       103
FT                   /note="AH2-4; nucleotide a or g"
FT   variation       176
FT                   /note="AH2-5; used for animal identification and kinship
FT                   analysis; nucleotide c or t"
FT   variation       279
FT                   /note="AH2-6; nucleotide c or t"
FT   variation       302
FT                   /note="AH2-7; nucleotide a or g"
FT   primer_bind     complement(328..344)
FT                   /note="MARC primer ID: 14612; derived from the Bos taurus
FT                   interleukin 8 (IL8) sequence deposited in GenBank Accession
FT                   Number AF061521"
XX
SQ   Sequence 344 BP; 90 A; 64 C; 61 G; 125 T; 4 other;
     atcctttttc cattgcttct aagaattcct cagtaaagat gccaatgaaa cttcaaaaca        60
     aatctacttc agtgcctcat gtactgtgtg ggtctggtgt agrgttgtca gataaaatac       120
     aggatgtcca gttatatttg aatattaagt aaaacaatga atattttttc agtgtygcat       180
     gtacattgtt ccatgtagga catgcttata ttttagaaat tattcattgt atactgtaaa       240
     ttccaatcga tctggaaatc ctgctttttt gttttcggyt tttgttaatc ttgcaaccct       300
     crcctgctgg ccaggattcc cgagtgcctg ttgaactgcg cctt                        344
//