ID   HIM437043  standard; RNA; VRL; 1515 BP.
XX
AC   AJ437043;
XX
SV   AJ437043.1
XX
DT   22-JUL-2002 (Rel. 72, Created)
DT   22-JUL-2002 (Rel. 72, Last updated, Version 1)
XX
DE   Human immunodeficiency virus type 1 mRNA for gag polyprotein (gag gene),
DE   clone g24s2
XX
KW   gag gene; gag polyprotein.
XX
OS   Human immunodeficiency virus type 1
OC   Viruses; Retroid viruses; Retroviridae; Lentivirus;
OC   Primate lentivirus group.
XX
RN   [1]
RP   1-1515
RA   Saurya S.;
RT   ;
RL   Submitted (21-FEB-2002) to the EMBL/GenBank/DDBJ databases.
RL   Saurya S., Haemtological Medicine, Cambridge University, MRC Centre, Hills
RL   Road, Cambridge CB2 2QH, UNITED KINGDOM.
XX
RN   [2]
RA   Saurya S.;
RT   "Molecular characterization of HIV-1 from HAART treated AIDS patients";
RL   Thesis (2002), University of Cambridge, Cambridge, United Kingdom.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1515
FT                   /db_xref="taxon:11676"
FT                   /virion
FT                   /organism="Human immunodeficiency virus type 1"
FT                   /clone="g24s2"
FT                   /isolate="patient 24"
FT   CDS             1..1254
FT                   /gene="gag"
FT                   /product="gag polyprotein"
FT                   /function="involved in HIV-1 assembly"
FT                   /protein_id="CAD26932.1"
FT                   /translation="MGARASVLSGGELDRWEKIRLRPGGKKQYRLKHIVWASRELERFA
FT                   VNPGLLETSDGCRQILGQLQPSLQTGSEELRSLYNTVATLYCVHQRIDVRDTKEALDKI
FT                   EEEQNKCKKKAQQAAADTGNSSPGNISQVSQNYPIVQNLQGQMVHQAISPRTFNAWVKV
FT                   VEEKAFSPEGIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHP
FT                   VHAGPIAPGQMREPRGSDIAGSTSTLQEQINWMTSNPPIPVGEIYKRWIILGLNKIVRM
FT                   YSPTSILDIRQGPKEPFRDYVERFYKTLRAEQASQEVKNWMTETLLVQKANPDCKTILK
FT                   ALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVNPASIMIQKGNFRNQRKPVKCFNC
FT                   GKEGHVARNCRAPRKKAC"
XX
SQ   Sequence 1515 BP; 551 A; 306 C; 370 G; 288 T; 0 other;
     atgggtgcga gagcgtcggt attaagcggg ggtgaattag atagatggga aaaaattcgg        60
     ttgcggccag ggggaaagaa acaatataga ctaaaacata tagtatgggc aagcagagag       120
     ctagaacgat tcgcagttaa ccctggcctg ttagaaacat cagacggctg tagacaaata       180
     ctgggacagc tacagccatc ccttcagaca ggatcagaag aacttagatc attatataat       240
     acagtagcaa ccctctattg tgtacatcaa aggatagatg taagagacac caaggaagct       300
     ttagacaaga tagaggaaga gcaaaacaaa tgtaagaaaa aggcacagca agcagcagct       360
     gacacaggaa acagcagccc aggaaacatc agtcaggtca gccaaaatta ccctatagtt       420
     cagaaccttc aggggcaaat ggtacatcag gccatatcac ctagaacttt taatgcatgg       480
     gtaaaagtag tagaagagaa ggctttcagc ccagaaggta tacccatgtt ttcagcatta       540
     tcagaaggag ccaccccaca agatttaaac accatgctaa acacagtggg gggacatcag       600
     gcagccatgc aaatgttaaa agagaccatc aatgaggaag ctgcagaatg ggatagagtg       660
     catccagtgc atgcagggcc tattgcacca ggccagatga gagaaccaag gggaagtgac       720
     atagcaggaa gcactagtac ccttcaggaa caaataaact ggatgacaag taatccacct       780
     atcccagtag gagaaatcta taaaagatgg ataatcctgg gattaaataa aatagtgaga       840
     atgtatagtc ccaccagcat tctggacata agacaaggac caaaagaacc ctttagagat       900
     tatgtagaac ggttctataa aactctaagg gctgagcaag cttcacagga ggtaaaaaat       960
     tggatgacag aaaccttgtt ggtccaaaag gcaaacccag attgtaagac tattttaaaa      1020
     gcattgggac cagcagccac actagaagaa atgatgacag catgtcaggg agtgggggga      1080
     cccggccata aagcaagagt cttggctgaa gcaatgagcc aagtaaatcc agcttccata      1140
     atgatacaaa aaggcaattt taggaaccaa agaaagcctg ttaagtgttt caattgtggc      1200
     aaagaagggc atgtagccag aaattgcagg gcccctagga aaaaggcctg ttgaaaatgt      1260
     gaaaaggaag gacaccaaat gaaagattgt actaagagac aggttaattt tttagggaaa      1320
     atctggcctt cccacaaggg gaggccaggg aatttccttc agagcagacc agagccatca      1380
     gcccctccag cagagagctt caggtttggg gaggagacaa caactccccc tcagaaacag      1440
     gagccgatag acaaggaact gtatcctaca acctccctca gatcactctt tggcaacgac      1500
     ccatcgtcac aataa                                                       1515
//