ID   AE014402   standard; DNA; PRO; 10086 BP.
XX
AC   AE014402; AE014291;
XX
SV   AE014402.1
XX
DT   02-OCT-2002 (Rel. 73, Created)
DT   03-OCT-2002 (Rel. 73, Last updated, Version 2)
XX
DE   Brucella suis 1330 chromosome I section 88 of 190 of the complete genome.
XX
KW   .
XX
OS   Brucella suis 1330
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae;
OC   Brucella; Brucella melitensis; Brucella melitensis biovar Suis.
XX
RN   [1]
RP   1-10086
RA   Paulsen I., Seshadri R., Nelson K.E., Eisen J.A., Heidelberg J.F.,
RA   Read T.D., Dodson R.J., Umayam L.A., Brinkac L.M., Beanan M.J.,
RA   Daugherty S.C., Deboy R., Durkin A.S., Kolonay J.F., Madupu R.,
RA   Nelson W.C., Ayodeji B., Kraul M., Shetty J., Malek J.A., Van Aken S.E.,
RA   Riedmuller S., Tettelin H., Gill S., White O., Salzberg S.L., Hoover D.L.,
RA   Lindler L., Halling S.M., Boyle S.M., Fraser C.M.;
RT   "The Brucella suis genome reveals fundamental similarities between animal
RT   and plant pathogens and symbionts";
RL   Proc. Natl. Acad. Sci. U.S.A. 99:13148-13153(2002).
XX
RN   [2]
RP   1-10086
RA   Paulsen I., Seshadri R., Nelson K.E., Eisen J.A., Heidelberg J.F.,
RA   Read T.D., Dodson R.J., Umayam L.A., Brinkac L.M., Beanan M.J.,
RA   Daugherty S.C., Deboy R., Durkin A.S., Kolonay J.F., Madupu R.,
RA   Nelson W.C., Ayodeji B., Kraul M., Shetty J., Malek J.A., Van Aken S.E.,
RA   Riedmuller S., Tettelin H., Gill S., White O., Salzberg S.L., Hoover D.L.,
RA   Lindler L., Halling S.M., Boyle S.M., Fraser C.M.;
RT   ;
RL   Submitted (14-AUG-2002) to the EMBL/GenBank/DDBJ databases.
RL   The Institute for Genomic Research, 9712 Medical Center Dr, Rockville, MD
RL   20850, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..10086
FT                   /chromosome="I"
FT                   /db_xref="taxon:204722"
FT                   /organism="Brucella suis 1330"
FT                   /strain="1330"
FT   CDS             complement(94..1503)
FT                   /codon_start=1
FT                   /note="identified by match to PFAM protein family HMM
FT                   PF00120"
FT                   /transl_table=11
FT                   /gene="glnA"
FT                   /product="glutamine synthetase, type I"
FT                   /protein_id="AAN29926.1"
FT                   /translation="MTTANDILKQIKDNDVKFVDLRFTDPKGKLHHVTMDIGLVDEDMF
FT                   VDGVMFDGSSIAGWKAINESDMVLMPDPETAHIDPFFAQSTLVILCDILEPLSGESYSR
FT                   DPRTTAKKAEAYLKSLGIGDTVYVGPEAEFFVFDDVKFKADPFNTGFKLDSAELPSNDD
FT                   TDYETGNLGHRPRVKGGYFPVPPIDSLQDMRSEMLTVLSEMGVTVEKHHHEVASAQHEL
FT                   GTKFDTLVRNADKMQIQKYVVHQVANAYGKTATFMPKPVFGDNGSGMHVHFSIWKDGKP
FT                   TFAGNEYAGLSENCLYFIGGVIKHAKAVNAFTNPSTNSYKRLVPGYEAPVLLAYSARNR
FT                   SASCRIPFGSSPKSKRLEVRFPDPSANPYLCFSALLMAGLDGIKNKIHPGQAMDKDLYD
FT                   LPPKELKQIPTVCGSLREALQSLDKDREFLKAGGVFSDDQIDSFIELKMAEVMRFEMTP
FT                   HPVEFDMYYSV"
FT   CDS             complement(1651..1989)
FT                   /codon_start=1
FT                   /note="similar to GP:15156872, GB:X12795, GB:X16155,
FT                   SP:P10589, PID:30140, and PID:31067; identified by sequence
FT                   similarity; putative"
FT                   /transl_table=11
FT                   /gene="glnB"
FT                   /product="nitrogen regulatory protein P-II"
FT                   /protein_id="AAN29927.1"
FT                   /translation="MKKIEAIIKPFKLDEVKEALQEVGLQGITVIEAKGFGRQKGHTEL
FT                   YRGAEYVVDFLPKVKVEVIVADETVDSAIEAIRKAAQTGRIGDGKIFVSNIEEVIRIRT
FT                   GESGVDAI"
FT   CDS             2296..3801
FT                   /codon_start=1
FT                   /note="identified by match to PFAM protein family HMM
FT                   PF03853"
FT                   /transl_table=11
FT                   /gene="BR1006"
FT                   /product="YjeF family protein"
FT                   /protein_id="AAN29928.1"
FT                   /translation="MFELLTPEEMARADRLTMEGGIKDGFALMLAAGRAVADIAQHMFP
FT                   QKQPVAVLCGPGNNGGDGYVAAQYLLEAGYEAVCFAAAPPRQGTDAMRASIFYKGQVRD
FT                   LNEFSPASFGGIIDALYGAGLARAVEGAQATVIDAVNASGLPVVAVDLPSGISGATGMA
FT                   LGAAMRAKATVTFFRKKPGHLLQPGRAHCGIIHIADIGIPDRILGEINPRVFENSPELW
FT                   ADSLPSPAVDAHKYSRGHAAVFSGAMHSTGAARLSAMAAARSGAGAVTLLSPPDALAVN
FT                   AAHLTSIMVRETRSQQDAAQFITDRKVTAAVLGPGYGNPAFARDYTKMLLSAASGKAGQ
FT                   FRGLVLDADGITAFENKPDELFDTHRSSATALVLTPHEGEFKRLFPDIAEDNTSKIDKA
FT                   RKAAMRANAVVIYKGPDTVIAEPGGLAVINSNGTPFLATAGSGDVLTGIVCGLLAQGMA
FT                   PFAAACASVWVHADAARRFGHGLIAEDLPAQLPAVWSSLSRFG"
FT   CDS             complement(3832..4104)
FT                   /codon_start=1
FT                   /note="identified by Glimmer2; putative"
FT                   /transl_table=11
FT                   /gene="BR1007"
FT                   /product="hypothetical protein"
FT                   /protein_id="AAN29929.1"
FT                   /translation="MISGLVKQLLIVAFSFSSFSLAAEAKDMQQTELPGVKPQKPIVTA
FT                   PPPAPEPDQASRGSGKHFRVGNTDVSISGDVIIDVGAGQNHRSDH"
FT   CDS             complement(4101..4805)
FT                   /codon_start=1
FT                   /note="similar to GB:X65933, SP:Q05097, and PID:49077;
FT                   identified by sequence similarity; putative"
FT                   /transl_table=11
FT                   /gene="cbbZ"
FT                   /product="phosphoglycolate phosphatase"
FT                   /protein_id="AAN29930.1"
FT                   /translation="MSPVSQKPIIVFDLDGTLVDTAPDLLDSLNHCLAISGLKTADRGS
FT                   LRRFVGQGARVMIERAFAAQQQQLDDARLDKLVEEFRAHYAAHMPGHSSFFPGALEAMD
FT                   RFASNGYQLAVCTNKYEELSVKLLTSMGEAARFAAICGADTFSWRKPDPRHLIETIARA
FT                   GGNRDRALMVGDSRTDIDTAKAAGIPVVAVDFGYSDLPVQHYEPSRVISHYNEFTLEMA
FT                   GDLIAAVADPAQ"
FT   CDS             4860..4973
FT                   /codon_start=1
FT                   /note="identified by Glimmer2; putative"
FT                   /transl_table=11
FT                   /gene="BR1009"
FT                   /product="hypothetical protein"
FT                   /protein_id="AAN29931.1"
FT                   /translation="MGSSSLAPTNMGEFLQLVSNGSFVTPRLRARAFPAEM"
FT   CDS             5152..5850
FT                   /codon_start=1
FT                   /note="identified by match to TIGR protein family HMM
FT                   TIGR00021"
FT                   /transl_table=11
FT                   /gene="rpiA"
FT                   /product="ribose 5-phosphate isomerase A"
FT                   /protein_id="AAN29932.1"
FT                   /translation="MDEARKLKIAAAAEALTYVKDGMRLGIGTGSTAEEFVRLLAEKVK
FT                   GGFRVIGVPTSERTAKLCEELGVALTTLEETPHLDLTIDGADEVDGELSLIKGGGGALL
FT                   REKIVAAASDSMIVIADQSKVVETLGRFPLPIEVNRFGLGATIRAIEAAAVKCGLAGPL
FT                   NLRLKDGSPFLTDGGHYIVDASFGRIPDPKTLSDALFAIPGVVEHGLFIGLARAAIIAG
FT                   TDGIRTMNRS"
FT   CDS             5876..6412
FT                   /codon_start=1
FT                   /note="identified by Glimmer2; putative"
FT                   /transl_table=11
FT                   /gene="BR1011"
FT                   /product="conserved hypothetical protein"
FT                   /protein_id="AAN29933.1"
FT                   /translation="MIPATGFRRLIAPFSALVLMAGVHSAFAQEISESHLEAARAAISA
FT                   INATEQFDQILPSAARALKGELIQKDPNLEALITKTVDDKALALASRRADLETESARAY
FT                   AKAFTEDELKAITAFYTSPAGKKLLSEGPIVTREVVKAANIWQNGVARDLARSVAEVLA
FT                   AQAGATAAPQQPAKQ"
FT   CDS             6566..7960
FT                   /codon_start=1
FT                   /note="similar to GP:15156698, GB:L14812, GB:M74547,
FT                   SP:P28749, PID:292374, and PID:347378; identified by
FT                   sequence similarity; putative"
FT                   /transl_table=11
FT                   /gene="gor"
FT                   /product="glutathione reductase"
FT                   /protein_id="AAN29934.1"
FT                   /translation="MTGFDYDLFVIGGGSGGVRAGRLAGAIGKKVGLAEEYRMGGTCVI
FT                   RGCVPKKLFVYASQFPEHFEDSAGYGWSMGEAAFDWKKLIAAKDKEISRLEGLYRKGLE
FT                   NSHVDIFASRAELIDEHTIELKADGRRVTADKILIATGGRPNTHESLPGHEYCISSNEA
FT                   FHLEELPKSIVIAGGGYIAVEFANIFHGLGVETTLVYRGKEILSRFDHDIRSLLHETME
FT                   AKGIRILCGAIFEKVEKKADGKLSVELSNGETLETDQAMLALGRIPNTDGLGLEKAGVK
FT                   IDKSGAIEVDDYSRTNVENIWAVGDVTNRVQLTPVAIHEAMCFLETAFKDNPTKPDHEL
FT                   IATAVFSQPEIGTVGLSEDEAAKKYPELEIYRALFRPMKNTLSGRSEKTLMKLVVESKS
FT                   RKVLGAHIMGPDAGEMAQLLGISLKAGATKDDFDRTMAVHPTATEELVTMYKPTYRVVD
FT                   GKKIEG"
FT   CDS             8169..9557
FT                   /codon_start=1
FT                   /note="identified by match to PFAM protein family HMM
FT                   PF01474"
FT                   /transl_table=11
FT                   /gene="dhs"
FT                   /product="phospho-2-dehydro-3-deoxyheptonate aldolase,
FT                   class II"
FT                   /protein_id="AAN29935.1"
FT                   /translation="MTKNWTPQSWRSKPIRQVPFYPDAQALNDVEARLRTYPPLVFAGE
FT                   ARKLKEQLAAVAGGKAFLLQGGDCAESFAEHGADNIRDFFRVFLQMAIVLTFGASKPVV
FT                   KVGRIAGQFAKPRSSDMETKDGVELPSYRGDIINGIEFDESSRIPDPQRQDMAYRQAAA
FT                   TLNLLRAFAQGGYANLENVHQWMLGFVGKSPQAERYAALAQRISETMNFMRAIGITAES
FT                   NQALRETDFYTSHEALLLGYEEALTRIDSTSGDWYGTSGHMIWIGDRTRQPDHAHIEYC
FT                   RGIKNPLGLKCGPSLQPDDLIRLIDLLNPENEAGRLTLIARFGYDKVGDHLPQLIRAVE
FT                   RVGRTVVWSCDPMHGNTITAGGYKTRPFDRILKEVESFFAIHRAEGTHPGGIHIEMTGK
FT                   NVTECTGGARAISAEDLHDRYHTHCDPRLNADQALELAFLLAELLKRSVMPEWKSGPQS
FT                   PECN"
FT   CDS             9661..10011
FT                   /codon_start=1
FT                   /note="similar to SP:P00556; identified by sequence
FT                   similarity; putative"
FT                   /transl_table=11
FT                   /gene="dgkA"
FT                   /product="diacylglycerol kinase"
FT                   /protein_id="AAN29936.1"
FT                   /translation="MQRILLAFLNSMRALKHLAGNEKAVQQELLLFLISLPVAGFLAPT
FT                   WLAFLLMTGSILFLVLVEVLNTAIEATCDAVSLDFHEQIKIAKDCGSLAVLIAILFVAV
FT                   IWAYIIATTYLA"
XX
SQ   Sequence 10086 BP; 2185 A; 2730 C; 2927 G; 2244 T; 0 other;
     gataaaatga agaaaccccg gcgaaagccg gggtttctct tttgcgcgcg ctttttagcg        60
     cgtcgttccc ctcggtaatg ggtcgttata gctttatacc gagtaataca tatcgaactc       120
     gaccgggtgc ggcgtcattt caaaacgcat cacttcagcc attttcagct cgatgaagct       180
     gtcgatctgg tcgtcggaga acacgccgcc agccttgagg aattcacgat ccttgtcgag       240
     cgactgtaga gcttcacgca gggagccgca gacggtcgga atctgcttca gttccttcgg       300
     cggcaggtcg tagagatcct tgtccatggc ctggcccgga tggatcttgt tcttgatgcc       360
     gtcaaggccc gccatcagaa gggccgagaa gcagagataa gggttggcgg acggatccgg       420
     gaagcggact tcgagacgct tcgatttcgg cgaggagccg aatggaatgc ggcaggaagc       480
//