LOCUS       AC094192               78703 bp    DNA     linear   HTG 08-JUL-2002
DEFINITION  Rattus norvegicus clone CH230-2D9, *** SEQUENCING IN PROGRESS ***,
            47 unordered pieces.
ACCESSION   AC094192
VERSION     AC094192.3  GI:21703368
KEYWORDS    HTG; HTGS_PHASE1.
SOURCE      Norway rat.
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Rodentia; Sciurognathi; Muridae; Murinae;
            Rattus.
REFERENCE   1  (bases 1 to 78703)
  AUTHORS   Muzny,D.M., Adams,C., Adio-Oduola,B., Ali-osman,F.R., Allen,C.,
            Alsbrooks,S.L., Amaratunge,H.C., Are,J.R., Ayele,M., Banks,T.,
            Barbaria,J., Benton,J., Bimage,K., Blankenburg,K., Bonnin,D.,
            Bouck,J., Bowie,S., Brieva,M., Brown,E., Brown,M., Bryant,N.P.,
            Buhay,C., Burch,P., Burkett,C., Burrell,K.L., Byrd,N.C.,
            Carron,T.F., Carter,M., Cavazos,S.R., Chacko,J., Chavez,D.,
            Chen,G., Chen,R., Chen,Z., Chowdhry,I., Christopoulos,C.,
            Cleveland,C.D., Cox,C., Coyle,M.D., Dathorne,S.R., David,R.,
            Davila,M.L., Davis,C., Davy-Carroll,L., Dederich,D.A.,
            Delaney,K.R., Delgado,O., Denn,A.L., Ding,Y., Dinh,H.H.,
            Douthwaite,K.J., Draper,H., Dugan-Rocha,S., Durbin,K.J.,
            Earnhart,C., Edgar,D., Edwards,C.C., Elhaj,C., Escotto,M.,
            Falls,T., Ferraguto,D., Flagg,N., Ford,J., Foster,P., Frantz,P.,
            Gabisi,A., Gao,J., Garcia,A., Garner,T., Garza,N., Gill,R.,
            Gorrell,J.H., Guevara,W., Gunaratne,P., Hale,S., Hamilton,K.,
            Harris,C., Harris,K., Hart,M., Havlak,P., Hawes,A., Hernandez,J.,
            Hernandez,O., Hodgson,A., Hogues,M., Holloway,C., Hollins,B.,
            Homsi,F., Howard,S., Huber,J., Hulyk,S., Hume,J., Jackson,L.E.,
            Jacobson,B., Jia,Y., Johnson,R., Jolivet,S., Joudah,S.,
            Karlsson,E., Kelly,S., Khan,U., King,L., Korvah,J., Kovar,C.,
            Kratovic,J., Kureshi,A., Landry,N., Leal,B., Lewis,L.C., Lewis,L.,
            Li,J., Li,Z., Lichtarge,O., Lieu,C., Liu,J., Liu,W., Loulseged,H.,
            Lozado,R.J., Lu,X., Lucier,A., Lucier,R., Luna,R., Ma,J.,
            Maheshwari,M., Mapua,P., Martin,R., Martindale,A., Martinez,E.,
            Massey,E., Mawhiney,E., McLeod,M.P., Meador,M., Mei,G., Metzker,M.,
            Miner,G., Miner,Z., Mitchell,T., Mohabbat,K., Morgan,M., Morris,S.,
            Moser,M., Neal,D., Newtson,J., Newtson,N., Nguyen,A., Nguyen,N.,
            Nguyen,N., Nickerson,E., Nwokenkwo,S., Oguh,M., Okwuonu,G.,
            Oragunye,N., Oviedo,R., Pace,A., Payton,B., Peery,J., Perez,L.,
            Peters,L., Pickens,R., Primus,E., Pu,L.L., Quiles,M., Ren,Y.,
            Rives,M., Rojas,A., Rojubokan,I., Rolfe,M., Ruiz,S., Savery,G.,
            Scherer,S., Scott,G., Shen,H., Shooshtari,N., Sisson,I.,
            Sodergren,E., Sonaike,T., Sparks,A., Stanley,H., Stone,H.,
            Sutton,A., Svatek,A., Tabor,P., Tamerisa,A., Tamerisa,K., Tang,H.,
            Tansey,J., Taylor,C., Taylor,T., Telfrod,B., Thomas,N., Thomas,S.,
            Usmani,K., Vasquez,L., Vera,V., Villalon,D., Vinson,R., Wang,Q.,
            Wang,S., Ward-Moore,S., Warren,R., Washington,C., Watlington,S.,
            Williams,G., Williamson,A., Wleczyk,R., Wooden,S., Worley,K.,
            Wu,C., Wu,Y., Wu,Y.F., Zhou,J., Zorrilla,S., Nelson,D.,
            Weinstock,G. and Gibbs,R.
  TITLE     Direct Submission
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 78703)
  AUTHORS   Worley,K.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-SEP-2001) Human Genome Sequencing Center, Department
            of Molecular and Human Genetics, Baylor College of Medicine, One
            Baylor Plaza, Houston, TX 77030, USA
REFERENCE   3  (bases 1 to 78703)
  AUTHORS   Worley,K.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUL-2002) Human Genome Sequencing Center, Department
            of Molecular and Human Genetics, Baylor College of Medicine, One
            Baylor Plaza, Houston, TX 77030, USA
COMMENT     On Jul 8, 2002 this sequence version replaced gi:17940905.
            -------------- Genome Center
                Center: Baylor College of Medicine
                Center code: BCM
                Web site: http://www.hgsc.bcm.tmc.edu/
                Contact: hgsc-help@bcm.tmc.edu
            -------------- Project Information
                Center project name: GAEF
                Center clone name: CH230-2D9
            -------------- Summary Statistics
                Sequencing vector: Plasmid; 
                Chemistry: Dye-terminator Big Dye: 100% of reads
                Assembly program: Phrap; version 0.990329
                Consensus quality: 34002 bases at least Q40
                Consensus quality: 36620 bases at least Q30
                Consensus quality: 39052 bases at least Q20
            --------------
            * NOTE: Estimated insert size may differ from sequence length
            *   (see http://www.hgsc.bcm.tmc.edu/docs/Genbank_draft_data.html).
            * NOTE: This is a 'working draft' sequence. It currently
            * consists of 47 contigs. The true order of the pieces
            * is not known and their order in this sequence record is
            * arbitrary. Gaps between the contigs are represented as
            * runs of N, but the exact sizes of the gaps are unknown.
            * This record will be updated with the finished sequence
            * as soon as it is available and the accession number will
            * be preserved.
            *        1     1243: contig of 1243 bp in length
            *     1244     1343: gap of unknown length
            *     1344     2895: contig of 1552 bp in length
            *     2896     2995: gap of unknown length
            *     2996     4040: contig of 1045 bp in length
            *     4041     4140: gap of unknown length
            *     4141     5342: contig of 1202 bp in length
            *     5343     5442: gap of unknown length
            *     5443     6850: contig of 1408 bp in length
            *     6851     6950: gap of unknown length
            *     6951     8155: contig of 1205 bp in length
            *     8156     8255: gap of unknown length
            *     8256     9463: contig of 1208 bp in length
            *     9464     9563: gap of unknown length
            *     9564    10833: contig of 1270 bp in length
            *    10834    10933: gap of unknown length
            *    10934    12171: contig of 1238 bp in length
            *    12172    12271: gap of unknown length
            *    12272    14002: contig of 1731 bp in length
            *    14003    14102: gap of unknown length
            *    14103    15506: contig of 1404 bp in length
            *    15507    15606: gap of unknown length
            *    15607    16922: contig of 1316 bp in length
            *    16923    17022: gap of unknown length
            *    17023    18209: contig of 1187 bp in length
            *    18210    18309: gap of unknown length
            *    18310    19363: contig of 1054 bp in length
            *    19364    19463: gap of unknown length
            *    19464    20796: contig of 1333 bp in length
            *    20797    20896: gap of unknown length
            *    20897    21919: contig of 1023 bp in length
            *    21920    22019: gap of unknown length
            *    22020    23134: contig of 1115 bp in length
            *    23135    23234: gap of unknown length
            *    23235    24812: contig of 1578 bp in length
            *    24813    24912: gap of unknown length
            *    24913    25984: contig of 1072 bp in length
            *    25985    26084: gap of unknown length
            *    26085    27520: contig of 1436 bp in length
            *    27521    27620: gap of unknown length
            *    27621    28790: contig of 1170 bp in length
            *    28791    28890: gap of unknown length
            *    28891    30446: contig of 1556 bp in length
            *    30447    30546: gap of unknown length
            *    30547    31835: contig of 1289 bp in length
            *    31836    31935: gap of unknown length
            *    31936    33070: contig of 1135 bp in length
            *    33071    33170: gap of unknown length
            *    33171    35185: contig of 2015 bp in length
            *    35186    35285: gap of unknown length
            *    35286    36705: contig of 1420 bp in length
            *    36706    36805: gap of unknown length
            *    36806    38621: contig of 1816 bp in length
            *    38622    38721: gap of unknown length
            *    38722    39948: contig of 1227 bp in length
            *    39949    40048: gap of unknown length
            *    40049    41852: contig of 1804 bp in length
            *    41853    41952: gap of unknown length
            *    41953    43491: contig of 1539 bp in length
            *    43492    43591: gap of unknown length
            *    43592    45374: contig of 1783 bp in length
            *    45375    45474: gap of unknown length
            *    45475    46641: contig of 1167 bp in length
            *    46642    46741: gap of unknown length
            *    46742    48038: contig of 1297 bp in length
            *    48039    48138: gap of unknown length
            *    48139    49531: contig of 1393 bp in length
            *    49532    49631: gap of unknown length
            *    49632    51854: contig of 2223 bp in length
            *    51855    51954: gap of unknown length
            *    51955    54008: contig of 2054 bp in length
            *    54009    54108: gap of unknown length
            *    54109    55397: contig of 1289 bp in length
            *    55398    55497: gap of unknown length
            *    55498    58275: contig of 2778 bp in length
            *    58276    58375: gap of unknown length
            *    58376    60144: contig of 1769 bp in length
            *    60145    60244: gap of unknown length
            *    60245    61764: contig of 1520 bp in length
            *    61765    61864: gap of unknown length
            *    61865    63695: contig of 1831 bp in length
            *    63696    63795: gap of unknown length
            *    63796    66364: contig of 2569 bp in length
            *    66365    66464: gap of unknown length
            *    66465    68604: contig of 2140 bp in length
            *    68605    68704: gap of unknown length
            *    68705    70308: contig of 1604 bp in length
            *    70309    70408: gap of unknown length
            *    70409    72599: contig of 2191 bp in length
            *    72600    72699: gap of unknown length
            *    72700    75666: contig of 2967 bp in length
            *    75667    75766: gap of unknown length
            *    75767    78703: contig of 2937 bp in length.
FEATURES             Location/Qualifiers
     source          1..78703
                     /organism="Rattus norvegicus"
                     /db_xref="taxon:10116"
                     /clone="CH230-2D9"
BASE COUNT    23161 a  13098 c  12920 g  23522 t   6002 others
ORIGIN      
        1 attcagttga ctgcaagtag ttcatcaata tttatattat atattatatt actgtgtatc       
//