LOCUS       HCA271056               3077 bp    RNA     linear   VRL 01-OCT-2002
DEFINITION  Human calicivirus Hu/SLV/Lyon/598/97/F partial gene for polyprotein
            and gene for basic protein, genomic RNA.
ACCESSION   AJ271056
VERSION     AJ271056.1  GI:14422277
KEYWORDS    basic protein; capsid protein; polyprotein; RNA polymerase.
SOURCE      Human calicivirus Hu/SLV/Lyon/598/97/F.
  ORGANISM  Human calicivirus Hu/SLV/Lyon/598/97/F
            Viruses; ssRNA positive-strand viruses, no DNA stage;
            Caliciviridae; Sapovirus.
REFERENCE   1
  AUTHORS   Schuffenecker,I., Ando,T., Thouvenot,D., Lina,B. and Aymard,M.
  TITLE     Genetic classification of 'Sapporo-like viruses'
  JOURNAL   Arch. Virol. 146 (11), 2115-2132 (2001)
  MEDLINE   21613349
REFERENCE   2  (bases 1 to 3077)
  AUTHORS   Schuffenecker,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-JAN-2000) Schuffenecker I., Laboratoire de Virologie,
            Universite Claude Bernard Lyon I, 8 avenue Rockefeller, 69473 Lyon
            cedex 08, FRANCE
FEATURES             Location/Qualifiers
     source          1..3077
                     /organism="Human calicivirus Hu/SLV/Lyon/598/97/F"                     
                     /strain="Hu/SLV/Lyon/598/97/F"
                     /db_xref="taxon:144196"
     CDS             <1..2460
                     /codon_start=1
                     /product="polyprotein"
                     /protein_id="CAC41375.1"
                     /db_xref="GI:14422278"
                     /db_xref="SPTREMBL:Q91EJ5"
                     /translation="TAASLAILERLSEATPITTSAVELLSSPARGHLNDIIFVTKSGL
                     PSGMPFTSVVNSLNHMTYFAAAVLKAYEQHGAPYTGNVFQVETVHTYGDDCIYSLCPA
                     TASIFETVLANLSAFGLRPTAADKTDKIAPTHTPVFLKRTLTCTPRGIRGLLDITSIR
                     RQFFWIKANRTTDISSPPAYDREARSVQLENALAYASQHGHAIFEEIAEIAKRTAQSE
                     GLVLTNVNYDQALATYEAWFIGGTGTGQDSPSEETTKLVFEMEGLGQPQSQRDQQVME
                     QVVTPQDTIGPTSALLLPTQVETPNASAQRVELAMATGAVTSNVPNCIRECFAAVTTI
                     PWTTRQAANTFLGAIHLGPRINPYTAHLSAMFAGWGGGFQVRVTISGSGLFAGRAITA
                     ILPPGVNPAAVQNPGVFPHAFIDARTTDPILINLPDIRPIDFHRVDGDDATASVGLWV
                     AQPLINPFQTGSVSTCWLSFETRPGPDFDFCLLKAPEQEMDNGISPANLLPRRLGRSR
                     GNRLGGRVVGLVVVAAAEQVNHHFGANSTTLGWSTLPIEPIAGAVSWYDDNNEHTKIR
                     GLLSAQGKGIIFPNIVNHWTDVSLSAKTSGQTTIPIAADNLNNSPGAAGPVVMFENNG
                     DVNESTANHGILTAASHDFTSLSQTIDAAGLWVWMPWTRNKPDGRTNTNVYITPTWIN
                     GNPARPIHEKCTNMVGTNFQFGGTGTNNIMLWQEQHFTSFPGAAEVYCSQLESTAEMF
                     QNNVVNIPANQMAVFNVETAGNTFQIGILPNGYSVTNAAIGTHQLLDYETSFRFVGLF
                     PQSTSLQGPNGNAGRAVRFLE"
     CDS             2460..2960
                     /codon_start=1
                     /vvv		     
                     /product="basic protein"
                     /protein_id="CAC41376.1"
                     /db_xref="GI:14422279"
                     /db_xref="SPTREMBL:Q91EJ4"
                     /translation="MSWFTGAALAAGSVVDMAGTISSIVAQHRQLDLMARANRIQQDW
                     VNRQEALITRGQDISRDLAVNGTAQRVDSLVKAGFTPVDARRLAGGTESVQYGLLDRP
                     ILQRSVLSGISETRHLQSVQGALSAFKNGSSYGAPPAPAGFVNPNYQASPPKLTIGPR
                     PPVTNV"
BASE COUNT      759 a    871 c    753 g    694 t
//